#!/usr/bin/perl -w print "\n"; print "Input FASTA filename to divide:"; $file=; open FILE, "$file"; $i=0; while(defined($line=)){ chomp($line); if($line=~/^>/){ $i++; open (OUTFILE, ">>$i.$file"); print $i.$file; print OUTFILE "$line"; print OUTFILE "\n"; } else{ print OUTFILE "$line"; } }